Projects per cycle
Computational Biology @ University of Nebraska-Lincoln, 2016 to 2026
View as table
| Projects | |
|---|---|
| 2016 | 5 |
| 2017 | 4 |
| 2018 | 4 |
| 2019 | 5 |
| 2020 | 0 |
| 2021 | 0 |
| 2022 | 0 |
| 2023 | 0 |
| 2024 | 0 |
| 2025 | 0 |
| 2026 | 0 |
PROJECTS
Computational Biology @ University of Nebraska-Lincoln GSoC projects
18 accepted projects across 4 cycles, 2016 to 2019. Each one links to its contributor, mentors and code.
Projects listed
18
Across 4 cycles
In GSoC 2026
–
Not taking part
Busiest cycle
2019
5 projects
Mentors named
11
Across all listed projects
First cycle
2016
Latest 2019
ccNetViz Project : Advanced Custom Label And Text Formatting
Himanshu JotwaniMentored by Ales Saska, Tom Helikar
The Purpose of this project is to add advanced label formatting features to the ccNetviz library for graph Visualizations without affecting the...
Advanced Node, Edge, Arrow Plugin Library
Caner AkdaşMentored by Ales Saska, Tom Helikar
Advanced Node, Edge, Arrow Plugin Library This plugin draws the desired types of nodes and arrows on a non-visible canvas. These dynamically drawn...
Edge Animations for Large-Scale Network Graphs
Xiaodong ZhaoMentored by Resa Helikar, Ales Saska
With ccNetViz, this large graph render library using WebGL, I'll add edge animations on it. Including color animations, speed control and other fancy...
Web Pipeline for Flux Balance Analysis
Aman DaveMentored by Robert Moore, Achilles Rasquinha
The project is based upon Flux Balance Analysis, which is a model used for simulating metabolism. It is used in genome-scale reconstructions of...
Web Pipeline For Kinetic (ODE-Based) Models
Mohamed ShadabMentored by Robert Moore, Achilles Rasquinha
Ordinary differential equations are widely used for modelling biological networks and processes of kinetics. The idea of the project is to create a ...
Javascript/WebGL Library For Interactive Visualization Of Large-Scale Network Graphs: Expanded Features.
Ana JeličićMentored by Aleš Saska
In this project I will add some new options to the CCNetViz JavaScript library (e.g. adding hide/show for nodes/edges, adding the context menu on...
ccNetViz
Gaurav GroverMentored by Aleš Saska
ccNetViz is a high-performance graph data visualization library that runs on WebGL (an in-browser library to run 3D graphics on GPU parallel...
Interactive Web Platform for R based Data Analysis
Tejasav KhattarMentored by Akram Mohammed, Achilles Rasquinha
The goal of this project is to develop the final version of cross-platform web-based application that enables anyone to perform various statistical...
Candis: A Software Tool for Cancer Prediction And Biomarker Identification Using High-throughput Data
Rupav JainMentored by Akram Mohammed, Achilles Rasquinha
Candis (portmanteau of Cancer and Discover) is an Open Source data mining suite (released under the GNU General Public License v3) for DNA...
Project Proposal-Javascript/WebGL Library For Interactive Visualization Of Large-Scale Network Graphs.
VenkataMentored by Aleš Saska, Tomas Helikar
A brief description on the plan of action and my understanding of the visualization project.
Network Visualization Layouts
Renato FabbriMentored by Aleš Saska, Tomas Helikar
This proposal is focused in network visualization layouts. I intend to implement canonical algorithms for ccNetViz and to develop variations. Most...
Mobile-Based Blood-Sample Image Analysis(iOS)
Abdul Fatir AnsariMentored by Tomas Helikar, Jiri Adamec
The aim of this project is to use the camera and processing power of modern day cell phones to develop an intuitive and user-friendly application for...
CancerDiscover: a GUI for cancer prediction and biometric identification using microarray data
Achilles RasquinhaMentored by Akram Mohammed, Tomas Helikar
Problem As of today, CancerDiscover has a not-so-easy build and workflow for users to conduct microarray experiments. Moreover, the current setup...
Idea 1: Javascript/WebGL Component For Interactive Visualization Of Large-Scale Network Graphs.
ZnbizMentored by David Tichy, Tom Helikar
This project will center around the development of additional optimization techniques to enable interactive visualization of very large networks, as...
Interactive Platform for Statistical Computing
shubhamkmrMentored by Akram Mohammed
The goal of this project is to develop a web-based platform that enables anyone to perform various statistical computations in an easy-to-use,...
Boolean-based Representations of Biological Systems
joshim5Mentored by Bhanwar Lal Puniya, Tom Helikar
The goal of this project is to develop a model that can visualize biological networks as logic gate circuits, and vice-versa. In recent years,...
Mobile Based Blood Analysis
Abdul FatirMentored by Tom Helikar, Jiri Adamec
The aim of this project is to use the camera and processing power of modern day cell phones to develop an intuitive and user-friendly application for...
Idea 1 - Ales Saska
ales.saskaMentored by David Tichy
Javascript/WebGL component for interactive visualization of large-scale network graphs
Data: Google Summer of Code public archive. Official GSoC archive