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Open Chromosome Collective

Open-Source Tools for 3D Genomics Research

GSoC Participation History

Technologies

Topics

Past Projects

beginner

Development of use case tutorials for Bioframe

The BioFrame Python library is a powerful tool designed for operations and analysis of genomic intervals, enabling users to effortlessly load genomic...

🐍 python
Topics:iosmlaiui

Rust-based acceleration of bioframe using polars and a new API to access assembly metadata

This project aims to enhance the bioframe library developed by Open2C, an organization that creates software for analyzing genomic data. A key focus...

Topics:apiaiui

Developing a binary pair format

Problem: Storing Hi-C contacts in a gzipped .tsv format, which is mainly used in pairtools, cause major slowdowns for computations and storing....

Topics:mlaiui

Frequently Asked Questions

Open Chromosome Collective | GSoC Org Profile & Stats - Learn about Open Chromosome Collective's involvement in Google Summer of Code (GSoC), their technologies, detailed reports.

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Contributor Readiness

Participation

Projects

Top Programming Languages

python dominates with primary adoption

Project Difficulty Distribution

Beginner
0
Intermediate
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Advanced
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No difficulty data available

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