About this project
Description from the program archive
<p><strong>An application for users to access biological data extracted from biomedical literature.</strong></p> <p>Project Mentor <strong>Augustin Luna</strong></p> <h3>Objectives</h3> <ul> <li>Easy search capabilities for biomedical entities (e.g., genes, proteins, and chemicals) for a corpus of extracted entities and interactions </li> <li>Users will be able to see the articles that mention entities of interest in easy to interpret manner. </li> <li>Users will be able to view results in a tabulated format </li> <li>Computational users will have access to an API to retrieve results programmatically</li> <li>Use modern technologies for better browser compatibility, user access, and simplified maintenance </li> </ul> <h3>Project Phases</h3> <ol> <li>Planning and deciding our approach towards the project </li> <li>Deciding on data structures</li> <li>Creating schemas and GraphQL interface </li> <li>Generating Wireframes </li> <li>Linking backend and frontend </li> <li>Working on functionalities like search, filter </li> <li>Basic prototype expected to be ready by 23rd June</li> <li>Taking feedback from community and mentors</li> <li>Implementing features advised by community and mentors</li> <li>Deploying the project</li> <li>Working on making a pipeline to automate data addition from <strong>PubMed Central</strong>.</li> </ol>