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GSOC 2016 PROJECT

Visualizing genomic alterations in TCGA cancer pathways in cBioPortal

The main goal of this project is to provide a new network view which is capable of visualizing curated TCGA pathways that are more attractive and...

Contributor
Istemi Bahceci
Mentor
Ugur Dogrusoz
Organization
National Resource for Network Biology (NRNB)Science and medicine
Program
GSoC 2016Completed

About this project

Description from the program archive

<p>The main goal of this project is to provide a new network view which is capable of visualizing curated TCGA pathways that are more attractive and more intuitive for the biologists with better analysis facilities using rich data of cBioPortal.</p>

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AIUI

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    Metin Can SiperMentored by Ugur Dogrusoz

  2. GSoC: JSBML Validation System

    Roman SchulteMentored by Andreas Dräger

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  6. Cytoscape command line scripting enhancements

    Ashish TiwariMentored by Scooter Morris

  7. Tutorials for Cytoscape.js

    joseph.stahlMentored by Max Franz

  8. Extending Cytoscape.js: Addition of Clustering Algorithms

    Zhaoyuan Zoe XiMentored by Mike Kucera

Data: Google Summer of Code public archive. This project in the official archive