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GSOC 2022 PROJECT

NetBoxR Updates

Contributor
Sara J
Mentors
AugustinL, Eric Liu
Organization
National Resource for Network Biology (NRNB)Science and medicine
Program
GSoC 2022Completed

About this project

Description from the program archive

netboxr is an R package for the automated discovery of biological process modules by network analysis. The project involves updating netboxr functionality. The proposed updates include the addition of new analysis features (more specifically, the ability to support weighted nodes in community detection and to parameterize the sizes of returned modules), and making netboxr more widely available to researchers via the Galaxy platform. Additionally, time-permitting, a pipeline for processing datasets from the cBioPortal using netboxr will also be created.

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Data: Google Summer of Code public archive. This project in the official archive