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GSOC 2020 PROJECT

Developing a tool for implementing clustering algorithms to Cytoscape app ClusterMaker2

In this project, I will develop a tool in Cytoscape app ClusterMaker2 that helps implementing new clustering algorithms in the app from inside...

Contributor
Maija Utriainen
Mentors
Dexter Pratt, John "Scooter" Morris, ALEXANDER PICO
Organization
National Resource for Network Biology (NRNB)Science and medicine
Program
GSoC 2020Completed · Advanced difficulty

About this project

Description from the program archive

<p>In this project, I will develop a tool in Cytoscape app ClusterMaker2 that helps implementing new clustering algorithms in the app from inside Cytoscape. Cytoscape is a widely used software in systems biology for analyzing large and complex networks. ClusterMaker provides a tool to detect communities within the networks using different algorithms. In order to make the implementation of new clustering algorithms in ClusterMaker, Cytoscape jobs package is utilized for executing the algorithms remotely.</p>

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Data: Google Summer of Code public archive. This project in the official archive