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GSOC 2020 PROJECT

Redevelop Model Bricks code base architecture

Model Bricks project is an effort focused on describing recurring patterns in biological networks. These patterns are described as small VCell models...

Contributor
Saksham Raghuvanshi
Mentors
Ann Cowan, Frank Morgan, Michael Blinov, dan vasilescu
Organization
National Resource for Network Biology (NRNB)Science and medicine
Program
GSoC 2020Completed

About this project

Description from the program archive

<p>Model Bricks project is an effort focused on describing recurring patterns in biological networks. These patterns are described as small VCell models that are retrieved from the VCell database and displayed online. To make Model Bricks recurring patterns more efficient and easily accessible, an entire code base shift from YAML to Vue.js is proposed. Vue.js features an incrementally adaptable architecture that focuses on declarative rendering and component composition. Vue.js component system will enable us to organize VCell APIs appropriately.</p> <p>The main objectives of this project are:</p> <ol> <li>Enhance Modelbricks.org user interface by using modern web design trends.</li> <li>Create a well-organized web architecture that will allow displaying of as many VCell elements as possible.</li> <li>Create VCell APIs for each element to be displayed.</li> <li>Enhance VCell user interface features to enable their display online.</li> <li>Write appropriate documentation.</li> </ol>

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Data: Google Summer of Code public archive. This project in the official archive